Single-cell m6A profiling in the mouse brain uncovers cell type-specific RNA methylomes and age-dependent differential methylation.

Tegowski M, Prater AK, Holley CL, Meyer KD.Nat Neurosci. 2024 Sep 24. doi: 10.1038/s41593-024-01768-3. Online ahead of print.PMID: 39317796

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Dinoflagellate mRNA is pervasively modified with m1A.

Liu JF, Jaffrey SR.EMBO Rep. 2024 Sep 20. doi: 10.1038/s44319-024-00263-x. Online ahead of print.PMID: 39304776 Free article. No abstract available.

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Mass Spectrometry-Based Direct Sequencing of tRNAs De Novo and Quantitative Mapping of Multiple RNA Modifications.
Yuan X, Su Y, Johnson B, Kirchner M, Zhang X, Xu S, Jiang S, Wu J, Shi S, Russo JJ, Chen Q, Zhang S.J Am Chem Soc. 2024 Sep 4. doi: 10.1021/jacs.4c07280.
PMID: 39231532
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RNA tertiary structure and conformational dynamics revealed by BASH MaP.
Oleynikov M, Jaffrey SR.bioRxiv [Preprint]. 2024 Aug 19:2024.04.11.589009. doi: 10.1101/2024.04.11.589009.PMID: 38645201 
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Understanding the redundant functions of the m6A-binding YTHDF proteins
Zaccara S, Jaffrey SR.RNA. 2024 Apr 16;30(5):468-481. doi: 10.1261/rna.079988.124.PMID: 38531646 
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Programmable protein expression using a genetically encoded m6A sensor
Bahjat F Marayati, Matthew G Thompson, Christopher L Holley, Stacy M Horner, Kate D Meyer
PMID: 38168988.  DOI: 10.1038/s41587-023-01978-3
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In situ visualization of m6A sites in cellular mRNAs
Charles J Sheehan, Bahjat Fadi Marayati, Janvi Bhatia, Kate D Meyer.
PMID: 37811887: DOI: 10.1093/nar/gkad787
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The Drosophila Nab2 RNA binding protein inhibits m6A methylation and male-specific splicing of Sex lethal transcript in female neuronal tissue.
Jalloh B, Lancaster CL, Rounds JC, Brown BE, Leung SW, Banerjee A, Morton DJ, Bienkowski RS, Fasken MB, Kremsky IJ, Tegowski M, Meyer K, Corbett A,  Moberg K.Elife. 2023 Jul 17;12:e64904. doi: 10.7554/eLife.64904.PMID: 37458420 Free PMC article
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mRNA ageing shapes the Cap2 methylome in mammalian mRNA 
Despic V, Jaffrey SR.
Nature. 2023 Feb;614(7947):358-366. doi: 10.1038/s41586-022-05668-z. Epub 2023 Feb 1.
PMID: 36725932 Free PMC article.
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Parent tRNA Modification Status Determines the Induction of Functional tRNA-Derived RNA by Respiratory Syncytial Virus Infection
Choi EJ, Wu W, Zhang K, Yuan X, Deng J, Ismail D, Buck DL, Thomason KS, Garofalo RP, Zhang S, Bao X.
Viruses. 2022 Dec 24;15(1):57. doi: 10.3390/v15010057.
PMID: 36680097 Free PMC article.
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Detection of m6A in single cultured cells using scDART-seq
Tegowski M, Meyer KD.
STAR Protoc. 2022 Aug 19;3(3):101646. doi: 10.1016/j.xpro.2022.101646. eCollection 2022 Sep 16.
PMID: 36042888 Free PMC article.
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Hidden codes in mRNA: Control of gene expression by m6A
Murakami S, Jaffrey SR.
Mol Cell. 2022 Jun 16;82(12):2236-2251. doi: 10.1016/j.molcel.2022.05.029.
PMID: 35714585 Free PMC article. Review.
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Improved Methods for Deamination-Based m6A Detection
Zhu H, Yin X, Holley CL, Meyer KD.
Front Cell Dev Biol. 2022 Apr 27;10:888279. doi: 10.3389/fcell.2022.888279. eCollection 2022.
PMID: 35573664 Free PMC article.
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scDART-seq reveals distinct m6A signatures and mRNA methylation heterogeneity in single cells
Tegowski M, Flamand MN, Meyer KD.
Mol Cell. 2022 Feb 17;82(4):868-878.e10. doi: 10.1016/j.molcel.2021.12.038. Epub 2022 Jan 25.
PMID: 35081365 Free PMC article.
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The chemotherapeutic CX-5461 primarily targets TOP2B and exhibits selective activity in high-risk neuroblastoma
Pan M, Wright WC, Chapple RH, Zubair A, Sandhu M, Batchelder JE, Huddle BC, Low J, Blankenship KB, Wang Y, Gordon B, Archer P, Brady SW, Natarajan S, Posgai MJ, Schuetz J, Miller D, Kalathur R, Chen S, Connelly JP, Babu MM, Dyer MA, Pruett-Miller SM, Freeman BB 3rd, Chen T, Godley LA, Blanchard SC, Stewart E, Easton J, Geeleher P. Nat Commun. 2021 Nov 9;12(1):6468. doi: 10.1038/s41467-021-26640-x.; PMID: 34753908 Free PMC article.